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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs12406669 chr1:22391563 G/C 4.14E-8 489 15.3 17.68 9.47 KM Plot
THCA rs12406741 chr1:119124388 G/A 8.02E-7 488 16.07 15.9 14.57 KM Plot
THCA rs12406908 chr1:16160550 A/C 0.000202 489 15.3 17.13 17.77 KM Plot
THCA rs12407763 chr1:184099450 C/T 0 475 15.67 17.6 25.93 KM Plot
THCA rs12408961 chr1:184049685 A/G 4.21E-6 485 15.23 17.7 17.77 KM Plot
THCA rs12409153 chr1:178798585 T/C 0 488 16.3 12.63 22.43 KM Plot
THCA rs12411007 chr1:157005358 C/T 9.78E-7 489 16.65 15.17 12.78 KM Plot
THCA rs12411231 chr1:184049394 C/T 3.76E-6 490 15.17 17.7 25.93 KM Plot
THCA rs12411407 chr10:81828231 C/T 0.00027 488 16.2 15.87 11.73 KM Plot
THCA rs12411408 chr10:81871396 G/A 0.000141 488 15.97 15.9 9.77 KM Plot
THCA rs12411479 chr10:81802402 A/G 0.00025 489 16.2 15.83 11.73 KM Plot
THCA rs12411481 chr10:81802456 A/G 0.000249 489 16.08 15.87 11.73 KM Plot
THCA rs12411845 chr10:81802479 T/C 0.00025 489 16.2 15.83 11.73 KM Plot
THCA rs12412226 chr10:81735288 C/T 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs12412257 chr10:81729603 C/T 0.000198 490 15.93 15.9 13.5 KM Plot